The first step was to reconfigure the Virtual
Directories for AutoDiscover and Outlook Anywhere to confirm they
were using the mail.domain.com FQDN. The following PowerShell command
can be used to set the Internal AutoDiscover URL;
Set-ClientAccessServer
-Identity CAS01 –AutoDiscoverServiceInternalUri https://mail.domain.com/Autodiscover/Autodiscover.xml
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The Outlook Anywhere directories can be
configured using the ECP, click on Servers and then Servers again
click the Client Access (CAS) servers and use the Pencil tool to open
the configuration window. Click Outlook Anywhere and ensure the
directories are set to mail.domain.com.
I then created an SVR DNS Records for AutoDiscover,
this is done using DNS Manager. Right click on the Forward Lookup
Zone for your domain and select Other Resource Record, scroll down
and select Service Location (SRV) and
click Create Record...
Fill in the New Resource Record details as
shown below.
Expand you domain and then _tcp and you
should see an SVR Record for _autodiscover.
Now if you re-launch Outlook there are no
certificate errors. Although this worked for me in this instance due to the
broad nature of this error this may not off course resolve the issue in your
environment.